Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Deba_2498KEGG: npu:Npun_F3155 hypothetical protein; SPTR: B2IYN0 Putative uncharacterized protein. (532 aa)    
Predicted Functional Partners:
Deba_2538
Restriction modification system DNA specificity domain protein; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: dde:Dde_3425 restriction endonuclease S subunits-like; PFAM: restriction modification system DNA specificity domain; SPTR: Q30VS8 Restriction endonuclease S subunits-like; PFAM: Type I restriction modification DNA specificity domain.
  
 
 0.933
Deba_2499
ABC transporter related protein; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR017871:IPR003593:IPR011527:IPR001140:IPR 003439:IPR017940; KEGG: dae:Dtox_0940 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: C8W366 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter.
     
 0.779
Deba_2500
ABC transporter related protein; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR017871:IPR003593:IPR011527:IPR005074:IPR 001140:IPR003439:IPR017940; KEGG: dae:Dtox_0939 ABC transporter related; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: C8W365 ABC transporter related; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family.
     
 0.779
Deba_2537
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.744
Deba_2497
COGs: COG2021 Homoserine acetyltransferase; InterPro IPR006296:IPR000073:IPR008220; KEGG: rca:Rcas_2039 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; PRIAM: Homoserine O-acetyltransferase; SPTR: A7NKV7 Homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
       0.709
Deba_2501
Membrane-fusion protein; InterPro IPR003997; KEGG: mno:Mnod_0405 membrane-fusion protein; SPTR: B8IB54 Membrane-fusion protein.
     
 0.689
Deba_2502
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: plt:Plut_0872 outer membrane protein-like; PFAM: outer membrane efflux protein; SPTR: Q3B4J4 Outer membrane protein-like; PFAM: Outer membrane efflux protein.
       0.689
Deba_2534
Conserved hypothetical protein; COGs: COG3943 Virulence protein; KEGG: mmw:Mmwyl1_4371 hypothetical protein; SPTR: A6W3I7 Putative uncharacterized protein.
  
    0.628
Deba_2535
COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; InterPro IPR011335; KEGG: xcc:XCC2095 DNA helicase related protein; SPTR: Q8P8Y4 DNA helicase related protein; PFAM: Protein of unknown function (DUF3320).
  
  
 0.524
Deba_3100
COGs: COG0438 Glycosyltransferase; KEGG: rmr:Rmar_0572 glycosyl transferase group 1; SPTR: C1ZFT8 Glycosyltransferase.
  
    0.486
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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