STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2523KEGG: mtp:Mthe_0882 hypothetical protein; SPTR: A0B7J6 Putative uncharacterized protein. (121 aa)    
Predicted Functional Partners:
Deba_3028
KEGG: dat:HRM2_34640 hypothetical protein; SPTR: C0Q934 Putative uncharacterized protein.
  
     0.705
Deba_0872
KEGG: dal:Dalk_2588 hypothetical protein; SPTR: B8FIP0 Putative uncharacterized protein.
  
     0.682
Deba_0225
KEGG: dol:Dole_2869 hypothetical protein; SPTR: A8ZYE7 Putative uncharacterized protein.
  
     0.587
Deba_0680
KEGG: dat:HRM2_47730 hypothetical protein; SPTR: C0QHG3 Putative uncharacterized protein.
  
     0.586
Deba_2143
KEGG: sfu:Sfum_1719 hypothetical protein; SPTR: Q1NV86 Putative uncharacterized protein.
  
     0.583
Deba_2481
Protein of unknown function DUF169; COGs: COG2043 conserved hypothetical protein; InterPro IPR003748; KEGG: dol:Dole_2553 hypothetical protein; PFAM: protein of unknown function DUF169; SPTR: A8ZWM6 Putative uncharacterized protein; PFAM: Uncharacterised ArCR, COG2043.
  
     0.568
Deba_0079
KEGG: dat:HRM2_34640 hypothetical protein; SPTR: B2DD79 Putative uncharacterized protein.
  
     0.560
Deba_1081
RNA-binding protein, predicted; InterPro IPR019300; KEGG: tye:THEYE_A0086 hypothetical protein; PFAM: RNA-binding protein, predicted; SPTR: B5YHB6 Putative uncharacterized protein; PFAM: Predicted RNA-binding protein.
  
     0.544
Deba_2039
KEGG: sfu:Sfum_4098 hypothetical protein; SPTR: A0LQR1 Putative uncharacterized protein.
  
     0.539
Deba_0070
Hypothetical protein; InterPro IPR017896:IPR017900; KEGG: sfu:Sfum_3217 hypothetical protein; SPTR: A0LN88 Putative uncharacterized protein.
  
     0.503
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.