STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2558Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: tgr:Tgr7_2077 protein of unknown function DUF1778; PFAM: Protein of unknown function DUF1778; SPTR: Q1NLF9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778). (92 aa)    
Predicted Functional Partners:
Deba_2559
InterPro IPR016181; KEGG: tgr:Tgr7_2078 GCN5-related N-acetyltransferase; SPTR: B8GTR4 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
 
 
 
 0.975
Deba_2596
InterPro IPR016181; KEGG: tgr:Tgr7_2078 GCN5-related N-acetyltransferase; SPTR: Q1NSG3 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
 
 
 
 0.894
Deba_2599
GCN5-related N-acetyltransferase; InterPro IPR016181:IPR000182; KEGG: sme:SMc00739 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Q92MI3 Putative uncharacterized protein; manually curated; PFAM: Acetyltransferase (GNAT) family.
 
 
   0.893
Deba_2560
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: neu:NE1104 hypothetical protein; PFAM: Protein of unknown function DUF1778; SPTR: Q82VI0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
 
     0.879
Deba_0855
KEGG: cdl:CDR20291_0586 hypothetical protein; SPTR: B0PCE4 Putative uncharacterized protein; PFAM: Pathogenicity locus.
 
 
   0.587
Deba_1308
GCN5-related N-acetyltransferase; InterPro IPR000182:IPR016181; KEGG: bth:BT_1258 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C0D719 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.
   
   0.530
ectA
L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.
   
   0.530
Deba_1966
Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
   
   0.530
Deba_2380
GCN5-related N-acetyltransferase; InterPro IPR016181:IPR000182; KEGG: dda:Dd703_2189 transcriptional regulator, MarR family with acetyltransferase activity; PFAM: GCN5-related N-acetyltransferase; SPTR: C6C7N4 Transcriptional regulator, MarR family with acetyltransferase activity; PFAM: Acetyltransferase (GNAT) family.
   
   0.530
Deba_2802
GCN5-related N-acetyltransferase; InterPro IPR000182:IPR016181; KEGG: sat:SYN_01678 acetyltransferase (GNAT) family protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Q2LXS4 Acetyltransferase (GNAT) family protein; PFAM: Acetyltransferase (GNAT) family.
   
   0.530
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.