STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2596InterPro IPR016181; KEGG: tgr:Tgr7_2078 GCN5-related N-acetyltransferase; SPTR: Q1NSG3 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family. (167 aa)    
Predicted Functional Partners:
Deba_2595
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: tgr:Tgr7_2077 protein of unknown function DUF1778; PFAM: Protein of unknown function DUF1778; SPTR: Q1NLF9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
 
 
 
 0.975
Deba_2558
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: tgr:Tgr7_2077 protein of unknown function DUF1778; PFAM: Protein of unknown function DUF1778; SPTR: Q1NLF9 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
 
 
 
 0.894
Deba_2598
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: pna:Pnap_1572 hypothetical protein; PFAM: Protein of unknown function DUF1778; SPTR: A1VMK8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
 
 
 
 0.894
Deba_2560
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: neu:NE1104 hypothetical protein; PFAM: Protein of unknown function DUF1778; SPTR: Q82VI0 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
 
 
 
 0.892
Deba_0748
Peptidase M22 glycoprotease; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: dps:DP1162 glycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; SPTR: Q6AP33 Related to glycoprotein endopeptidase; PFAM: Glycoprotease family.
  
 
 0.470
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.