STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2597Filamentation induced by cAMP protein Fic; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: gur:Gura_3067 filamentation induced by cAMP protein Fic; PFAM: filamentation induced by cAMP protein Fic; SPTR: A5G620 Filamentation induced by cAMP protein Fic; PFAM: Fic/DOC family. (375 aa)    
Predicted Functional Partners:
Deba_2599
GCN5-related N-acetyltransferase; InterPro IPR016181:IPR000182; KEGG: sme:SMc00739 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Q92MI3 Putative uncharacterized protein; manually curated; PFAM: Acetyltransferase (GNAT) family.
 
     0.544
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.524
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.524
Deba_3031
KEGG: gvi:glr2966 hypothetical protein; SPTR: Q7NCL2 Glr2966 protein.
    
 
 0.524
Deba_0299
KEGG: mca:MCA0835 fic family protein; SPTR: Q60AL5 Fic family protein.
  
   
 0.484
Deba_2598
Protein of unknown function DUF1778; COGs: COG4453 conserved hypothetical protein; InterPro IPR014795; KEGG: pna:Pnap_1572 hypothetical protein; PFAM: Protein of unknown function DUF1778; SPTR: A1VMK8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1778).
       0.464
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.