STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2725ATP synthase I; InterPro IPR008413; KEGG: dal:Dalk_2857 ATP synthase I; PFAM: ATP synthase I; SPTR: B8FBA3 ATP synthase I; PFAM: ATP synthase I chain. (126 aa)    
Predicted Functional Partners:
atpB-2
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
  
 
  0.976
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 
  0.961
Deba_2724
Hypothetical protein; InterPro IPR006162; KEGG: gsu:GSU0336 hypothetical protein; SPTR: Q74GB0 Putative uncharacterized protein; PFAM: Putative F0F1-ATPase subunit (ATPase_gene1).
 
    0.948
Deba_1483
KEGG: dal:Dalk_0095 hypothetical protein; SPTR: B8FKJ0 Putative uncharacterized protein.
  
     0.767
Deba_0826
KEGG: dol:Dole_1197 hypothetical protein; SPTR: A8ZXP5 Putative uncharacterized protein.
  
     0.756
Deba_1764
KEGG: dol:Dole_2107 hypothetical protein; SPTR: A8ZTX8 Putative uncharacterized protein.
  
     0.739
Deba_1935
KEGG: gsu:GSU3079 hypothetical protein; SPTR: Q748C8 Putative uncharacterized protein.
  
     0.726
Deba_3151
KEGG: sfu:Sfum_1611 hypothetical protein; SPTR: A0LIP6 Conserved hypothetical membrane protein.
  
     0.723
Deba_3113
KEGG: sat:SYN_00080 putative cytoplasmic protein; SPTR: Q2LWI3 Hypothetical cytosolic protein.
  
     0.721
Deba_1144
Protein of unknown function DUF1178; COGs: COG5319 conserved hypothetical protein; InterPro IPR009562; KEGG: dal:Dalk_4330 protein of unknown function DUF1178; PFAM: protein of unknown function DUF1178; SPTR: B8FMH2 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1178).
  
     0.702
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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