Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Deba_2753COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: dvm:DvMF_2848 CBS domain containing membrane protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: B8DRE8 CBS domain containing membrane protein; PFAM: CBS domain. (213 aa)    
Predicted Functional Partners:
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
     
  0.900
Deba_2752
Anaerobic cobalt chelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin. Belongs to the CbiK family.
  
    0.769
Deba_2754
Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641:IPR016035; KEGG: drt:Dret_1244 patatin; PFAM: Patatin; SPTR: C8X1W0 Patatin; PFAM: Patatin-like phospholipase.
       0.518
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.499
Deba_0586
COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: dol:Dole_1974 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily; SPTR: A8ZT95 Histone deacetylase superfamily; PFAM: Histone deacetylase domain.
  
    0.468
Deba_1277
COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286:IPR003084; KEGG: gme:Gmet_1739 histone deacetylase superfamily protein; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: Q39UV4 Histone deacetylase superfamily; PFAM: Histone deacetylase domain.
  
    0.468
Deba_1910
COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: mxa:MXAN_5908 histone deacetylase family protein; PFAM: histone deacetylase superfamily; SPTR: Q1CZX8 Histone deacetylase family protein; PFAM: Histone deacetylase domain.
  
    0.468
Deba_2751
ANTAR domain protein with unknown sensor; InterPro IPR005561:IPR011991:IPR011006; KEGG: bgl:bglu_2g09980 response regulator NasT; PFAM: ANTAR domain protein; SPTR: C5AHM2 Response regulator NasT; PFAM: ANTAR domain.
       0.468
Deba_1183
Hypothetical protein; KEGG: hmo:HM1_2365 acetoin utilization protein, subunit A; SPTR: B0TIH4 Acetoin utilization protein, subunit a.
 
    0.445
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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