STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2837InterPro IPR000835:IPR011991; KEGG: cac:CAC0559 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Q97LK1 Transcriptional regulator, MarR/EmrR family; PFAM: MarR family. (149 aa)    
Predicted Functional Partners:
Deba_2835
KEGG: dol:Dole_0396 hypothetical protein; SPTR: A8ZT42 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1329).
 
     0.678
Deba_2836
Patched family protein; COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR003392:IPR000731; KEGG: dal:Dalk_0753 patched family protein; PFAM: Patched family protein; SPTR: B8FHP1 Patched family protein; PFAM: Patched family; MMPL family.
       0.648
Deba_2834
KEGG: dol:Dole_2689 SH3 type 3 domain-containing protein; SPTR: A8ZXB3 SH3 type 3 domain protein; PFAM: Protein of unknown function (DUF1302).
  
    0.642
Deba_0464
InterPro IPR004360; KEGG: mac:MA0108 glyoxalase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C0EBN9 Putative uncharacterized protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
   
 0.567
Deba_1290
COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789:IPR013767:IPR003018:IPR013656:IPR 003661:IPR003594:IPR008207:IPR005467:IPR000014:IPR000700:I PR004358:IPR001610:IPR011006:IPR009082; KEGG: dvm:DvMF_1096 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS fold domain protein; GAF domain protein; PAS fold-4 domain protein; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain con [...]
  
  
 0.505
Deba_2483
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003593:IPR011527:IPR001140:IPR003439:IPR 017940; KEGG: bth:BT_0508 ABC transporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: Q8AAF7 ABC transporter ATP-binding protein; PFAM: ABC transporter transmembrane region; ABC transporter.
 
  
 0.428
Deba_1308
GCN5-related N-acetyltransferase; InterPro IPR000182:IPR016181; KEGG: bth:BT_1258 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C0D719 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.
  
   
 0.415
Deba_0191
GCN5-related N-acetyltransferase; COGs: COG3153 acetyltransferase; InterPro IPR000182:IPR016181; KEGG: dhd:Dhaf_2458 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: C6ISG3 Acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
  
     0.413
Deba_2482
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR017871:IPR003593:IPR011527:IPR001140:IPR 003439:IPR017940; KEGG: cbf:CLI_1144 ABC transport ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: B1Q7H1 ABC transport ATP-binding/permease protein; PFAM: ABC transporter transmembrane region; ABC transporter.
 
  
 0.409
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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