STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Deba_2842Molybdopterin oxidoreductase; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006963:IPR006656:IPR006657:IPR009010:IPR 006655; KEGG: dvl:Dvul_2794 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: Q1NQN8 Formate dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (713 aa)    
Predicted Functional Partners:
Deba_2841
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR017896:IPR017900; KEGG: sfu:Sfum_3286 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A0LNF7 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
 0.977
Deba_0960
COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; InterPro IPR006067:IPR011806; KEGG: dal:Dalk_4301 sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; PRIAM: Hydrogensulfite reductase; SPTR: Q93EU9 Dissimilatory sulfite reductase alpha subunit (Fragment); TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit.
 
  
 0.928
Deba_0959
COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits; InterProIPR005117:IPR006067:IPR001450:IPR017900:IPR 017896:IPR011808; KEGG: sfu:Sfum_4043 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PRIAM: Hydrogensulfite reductase; SPTR: A0LQK7 Sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: Nitrite an [...]
 
  
 0.927
Deba_2136
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR017938:IPR001834:IPR017927:IPR012165:IPR 008333:IPR001433:IPR019480; KEGG: sfu:Sfum_1970 oxidoreductase FAD/NAD(P)-binding subunit; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: A0LJQ2 Oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Ox [...]
    
 0.911
Deba_1178
COGs: COG0031 Cysteine synthase; InterPro IPR001926:IPR005856:IPR005859; KEGG: dal:Dalk_2651 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: B8FIV3 Cysteine synthase A; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases.
   
 
 0.908
Deba_0567
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterProIPR001450:IPR006311:IPR017909:IPR017896:IPR 017900; KEGG: dal:Dalk_0608 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FJN5 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.895
Deba_0568
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: dol:Dole_0454 polysulphide reductase NrfD; PFAM: Polysulphide reductase NrfD; SPTR: A8ZTK0 Polysulphide reductase NrfD; PFAM: Polysulphide reductase, NrfD.
 
 
 0.883
Deba_2020
Conserved hypothetical protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterProIPR019546:IPR001450:IPR017909:IPR017896:IPR 006311; KEGG: dal:Dalk_1084 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: Twin-arginine translocation pathway, signal sequence, subgroup; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8F941 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
 
 0.866
Deba_0984
Methyl-viologen-reducing hydrogenase delta subunit; COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins; InterProIPR013027:IPR004792:IPR001450:IPR003813:IPR 017900:IPR017896; KEGG: adg:Adeg_1078 methyl-viologen-reducing hydrogenase delta subunit; PFAM: methyl-viologen-reducing hydrogenase delta subunit; HI0933 family protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: C9RD78 Methyl-viologen-reducing hydrogenase delta subunit; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.853
Deba_2215
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: drt:Dret_0273 molybdopterin oxidoreductase, transmembrane subunit, putative; PFAM: Polysulphide reductase NrfD; SPTR: C8WZV0 Molybdopterin oxidoreductase, transmembrane subunit; PFAM: Polysulphide reductase, NrfD.
 
 
 0.853
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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