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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2903COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyc:PCC7424_2557 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: A0YU19 Glycosyltransferase involved in cell wall biogenesis-like protein; PFAM: Glycosyl transferase family 2. (316 aa)    
Predicted Functional Partners:
Deba_2902
Hypothetical protein; InterPro IPR000421:IPR008979; KEGG: sti:Sthe_1389 hypothetical protein; SPTR: D1C3K7 Putative uncharacterized protein.
  
  
 0.819
Deba_2901
Hypothetical protein; InterPro IPR000421:IPR008979; KEGG: saq:Sare_1697 hypothetical protein; SPTR: A8LWR4 Putative uncharacterized protein.
  
  
 0.683
Deba_2905
KEGG: amr:AM1_1028 hypothetical protein; SPTR: A0YKG9 Putative uncharacterized protein.
 
  
 0.641
Deba_2872
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dfe:Dfer_5100 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: C4D4T1 Glycosyl transferase; PFAM: Glycosyl transferase family 2.
  
     0.633
Deba_2904
Conserved hypothetical protein; InterPro IPR018062:IPR005242; KEGG: amr:AM1_1029 hypothetical protein; SPTR: B5VUR7 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
  
 0.604
Deba_0455
Undecaprenyl-phosphate glucose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR016040:IPR017473:IPR017475; KEGG: mxa:MXAN_2922 sugar transferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Q1PWC3 Similar to capsular polysaccharide synthesis protein; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; e [...]
 
  
 0.555
Deba_2900
KEGG: dma:DMR_04640 hypothetical protein; SPTR: C4XHZ3 Putative uncharacterized protein.
     
 0.406
Deba_0995
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: mag:amb1074 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Q2W8E7 Predicted glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
 0.403
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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