STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2965Hypothetical protein. (41 aa)    
Predicted Functional Partners:
Deba_2964
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dal:Dalk_2244 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8FIE7 Response regulator receiver protein; PFAM: Response regulator receiver domain.
       0.705
Deba_2963
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR005467:IPR004358:IPR009082; KEGG: dal:Dalk_2245 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B8FIE8 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
       0.555
Deba_2966
Sodium/sulphate symporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: dat:HRM2_38270 NadC2; PFAM: sodium/sulphate symporter; SPTR: C0QAV2 NadC2; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter.
       0.553
Deba_2967
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR000644:IPR011006; KEGG: dol:Dole_1341 response regulator receiver protein; PFAM: response regulator receiver; CBS domain containing protein; SMART: response regulator receiver; CBS domain containing protein; SPTR: A8ZYP0 Response regulator receiver protein; PFAM: CBS domain; Response regulator receiver domain.
       0.471
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.