STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2966Sodium/sulphate symporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: dat:HRM2_38270 NadC2; PFAM: sodium/sulphate symporter; SPTR: C0QAV2 NadC2; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter. (617 aa)    
Predicted Functional Partners:
Deba_2967
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR000644:IPR011006; KEGG: dol:Dole_1341 response regulator receiver protein; PFAM: response regulator receiver; CBS domain containing protein; SMART: response regulator receiver; CBS domain containing protein; SPTR: A8ZYP0 Response regulator receiver protein; PFAM: CBS domain; Response regulator receiver domain.
 
     0.864
Deba_2963
COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR005467:IPR004358:IPR009082; KEGG: dal:Dalk_2245 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B8FIE8 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
     0.674
Deba_3028
KEGG: dat:HRM2_34640 hypothetical protein; SPTR: C0Q934 Putative uncharacterized protein.
  
     0.617
Deba_0318
TrkA-C domain protein; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037:IPR016040; KEGG: dol:Dole_2399 TrkA domain-containing protein; PFAM: TrkA-C domain protein; Citrate transporter; SPTR: A8ZVL6 TrkA-C domain protein; PFAM: TrkA-C domain; Citrate transporter.
 
   
 0.595
Deba_2964
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: dal:Dalk_2244 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: B8FIE7 Response regulator receiver protein; PFAM: Response regulator receiver domain.
     0.581
Deba_2965
Hypothetical protein.
       0.553
Deba_2021
KEGG: dal:Dalk_1085 iron-sulfur cluster-binding protein; SPTR: B8F942 Iron-sulfur cluster-binding protein.
 
     0.549
Deba_2969
KEGG: bcv:Bcav_3932 hypothetical protein; SPTR: C5C533 Putative uncharacterized protein.
  
 
 0.541
Deba_2144
COGs: COG0777 Acetyl-CoA carboxylase beta subunit; InterPro IPR000438:IPR011762:IPR011763:IPR000022; KEGG: gsu:GSU2370 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase; SPTR: Q74AI4 Acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit.
     
 0.535
Deba_2141
Malic protein NAD-binding protein; COGs: COG0281 Malic enzyme; InterProIPR016040:IPR015884:IPR012188:IPR012301:IPR 012302:IPR002505; KEGG: glo:Glov_1262 malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; SPTR: B3E7A4 Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase; PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase.
  
  
 0.508
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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