STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_2968KEGG: maq:Maqu_0130 hypothetical protein; SPTR: A1TWW8 Putative uncharacterized protein. (67 aa)    
Predicted Functional Partners:
Deba_2969
KEGG: bcv:Bcav_3932 hypothetical protein; SPTR: C5C533 Putative uncharacterized protein.
       0.773
Deba_2967
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR000644:IPR011006; KEGG: dol:Dole_1341 response regulator receiver protein; PFAM: response regulator receiver; CBS domain containing protein; SMART: response regulator receiver; CBS domain containing protein; SPTR: A8ZYP0 Response regulator receiver protein; PFAM: CBS domain; Response regulator receiver domain.
       0.527
Deba_2970
KEGG: paa:Paes_0942 hypothetical protein; SPTR: A7BSE9 Putative uncharacterized protein.
       0.470
Deba_2966
Sodium/sulphate symporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: dat:HRM2_38270 NadC2; PFAM: sodium/sulphate symporter; SPTR: C0QAV2 NadC2; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter.
       0.450
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.