STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_3034Hypothetical protein; KEGG: ADRB1; adrenergic, beta-1-, receptor; K04141 adrenergic receptor, beta 1; SPTR: B5W707 Putative uncharacterized protein. (536 aa)    
Predicted Functional Partners:
Deba_3033
Hypothetical protein; KEGG: sro:Sros_9246 major facilitator superfamily MFS_1; SPTR: C2SUC1 Major facilitator superfamily MFS_1.
       0.741
Deba_3032
KEGG: ter:Tery_1189 hypothetical protein; SPTR: Q116M7 Putative uncharacterized protein.
       0.733
Deba_3031
KEGG: gvi:glr2966 hypothetical protein; SPTR: Q7NCL2 Glr2966 protein.
       0.609
Deba_3030
Hypothetical protein; KEGG: FAP262; flagellar associated protein; SPTR: A8IFL6 Flagellar associated protein.
       0.578
Deba_3029
Transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR016032:IPR000792:IPR000700:IPR011991; KEGG: dal:Dalk_3421 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: B8FLG3 Transcriptional regulator, LuxR family; PFAM: Bacterial regulatory proteins, luxR family.
       0.432
Deba_3035
COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: pca:Pcar_1355 putative methyl-accepting chemotaxis protein (MCP); PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Q1JZ62 Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain.
       0.408
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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