STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_3113KEGG: sat:SYN_00080 putative cytoplasmic protein; SPTR: Q2LWI3 Hypothetical cytosolic protein. (85 aa)    
Predicted Functional Partners:
Deba_1764
KEGG: dol:Dole_2107 hypothetical protein; SPTR: A8ZTX8 Putative uncharacterized protein.
  
     0.751
Deba_2725
ATP synthase I; InterPro IPR008413; KEGG: dal:Dalk_2857 ATP synthase I; PFAM: ATP synthase I; SPTR: B8FBA3 ATP synthase I; PFAM: ATP synthase I chain.
  
     0.721
Deba_1741
UspA domain protein; InterPro IPR006016:IPR014729; KEGG: dol:Dole_0159 UspA domain-containing protein; PFAM: UspA domain protein; SPTR: A8ZSQ6 UspA domain protein; PFAM: Universal stress protein family.
  
     0.715
Deba_3114
KEGG: mrd:Mrad2831_0725 hypothetical protein; SPTR: B1LXH0 Putative uncharacterized protein.
       0.693
Deba_0620
KEGG: ppd:Ppro_2684 hypothetical protein; SPTR: A1ASG7 Putative uncharacterized protein; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
  
     0.663
Deba_1483
KEGG: dal:Dalk_0095 hypothetical protein; SPTR: B8FKJ0 Putative uncharacterized protein.
  
     0.661
Deba_0987
KEGG: sfu:Sfum_1055 hypothetical protein; SPTR: A0LH47 Putative uncharacterized protein; PFAM: Ogr/Delta-like zinc finger.
  
     0.648
Deba_3115
Cellulase; COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: smr:Smar_0057 peptidase M42 family protein; PFAM: peptidase M42 family protein; PRIAM: Cellulase; SPTR: A3DKL0 Peptidase M42 family protein; PFAM: M42 glutamyl aminopeptidase.
       0.629
Deba_3151
KEGG: sfu:Sfum_1611 hypothetical protein; SPTR: A0LIP6 Conserved hypothetical membrane protein.
  
     0.628
Deba_1935
KEGG: gsu:GSU3079 hypothetical protein; SPTR: Q748C8 Putative uncharacterized protein.
  
     0.612
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.