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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_3155NIL domain protein; InterPro IPR018449:IPR001450:IPR017896:IPR017900; KEGG: dev:DhcVS_791 iron-sulfur cluster-binding protein, ferredoxin-like protein; PFAM: NIL domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8CNW3 4Fe-4S ferredoxin, iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain; NIL domain. (135 aa)    
Predicted Functional Partners:
Deba_3156
Protein of unknown function DUF39; COGs: COG1900 conserved hypothetical protein; InterPro IPR002708; KEGG: deh:cbdb_A872 hypothetical protein; PFAM: protein of unknown function DUF39; SPTR: Q3ZXP8 Putative uncharacterized protein; PFAM: Domain of unknown function DUF39.
 
  
  0.990
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.902
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
     
  0.900
Deba_1382
COGs: COG0460 Homoserine dehydrogenase; InterProIPR005106:IPR001342:IPR002912:IPR019811:IPR 016204:IPR016040; KEGG: gsu:GSU1693 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; SPTR: Q74CI0 Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain.
     
  0.900
Deba_1178
COGs: COG0031 Cysteine synthase; InterPro IPR001926:IPR005856:IPR005859; KEGG: dal:Dalk_2651 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: B8FIV3 Cysteine synthase A; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases.
     
  0.800
Deba_0568
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: dol:Dole_0454 polysulphide reductase NrfD; PFAM: Polysulphide reductase NrfD; SPTR: A8ZTK0 Polysulphide reductase NrfD; PFAM: Polysulphide reductase, NrfD.
  
 
 0.784
Deba_1296
ApbE family lipoprotein; COGs: COG2122 conserved hypothetical protein; InterPro IPR003374:IPR007183; KEGG: sfu:Sfum_2124 hypothetical protein; PFAM: ApbE family lipoprotein; SPTR: A0LK55 Putative uncharacterized protein; PFAM: ApbE family.
 
     0.784
Deba_2215
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: drt:Dret_0273 molybdopterin oxidoreductase, transmembrane subunit, putative; PFAM: Polysulphide reductase NrfD; SPTR: C8WZV0 Molybdopterin oxidoreductase, transmembrane subunit; PFAM: Polysulphide reductase, NrfD.
  
 
 0.784
Deba_2218
InterPro IPR011031; KEGG: dol:Dole_2546 hypothetical protein; SPTR: A8ZWL9 Putative uncharacterized protein; PFAM: Class III cytochrome C family.
  
 
 0.771
Deba_0390
Molybdopterin dinucleotide-binding region; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963:IPR006656:IPR006657:IPR009010; KEGG: dol:Dole_1621 nitrate reductase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; SPTR: A9A025 Nitrate reductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.746
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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