STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_3208KEGG: dal:Dalk_2965 protein of unknown function DUF169; SPTR: B8FL20 Putative uncharacterized protein; PFAM: Uncharacterised ArCR, COG2043. (275 aa)    
Predicted Functional Partners:
Deba_1203
KEGG: dsa:Desal_1384 hypothetical protein; SPTR: C6BRK6 Putative uncharacterized protein; PFAM: Uncharacterised ArCR, COG2043.
  
     0.645
Deba_0794
KEGG: dma:DMR_26440 hypothetical membrane protein; SPTR: C4XUB3 Hypothetical membrane protein; PFAM: Protein of unknown function (DUF2975).
  
     0.573
Deba_1372
COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017:IPR017900; KEGG: dol:Dole_0770 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: A8ZVB9 Putative uncharacterized protein; PFAM: Cysteine-rich domain.
  
     0.567
Deba_2983
Hypothetical protein; InterPro IPR011031; KEGG: sat:SYN_02638 iron-sulphur-binding reductase; SPTR: C8QXC7 Cytochrome C family protein; TIGRFAM: doubled CXXCH domain.
  
     0.550
Deba_3207
KEGG: dma:DMR_04620 hypothetical protein; SPTR: C0W603 NLP/P60 protein.
       0.522
Deba_1651
Conserved hypothetical protein; COGs: COG0407 Uroporphyrinogen-III decarboxylase; KEGG: dal:Dalk_4908 hypothetical protein; SPTR: B8FDF3 Putative uncharacterized protein; PFAM: Uroporphyrinogen decarboxylase (URO-D).
  
     0.499
Deba_1781
KEGG: dvu:DVU0040 hypothetical protein; SPTR: Q72G21 Putative uncharacterized protein.
  
     0.487
Deba_2232
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain; InterPro IPR017896:IPR017900:IPR001450; KEGG: dal:Dalk_0385 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B8FH06 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain.
  
     0.440
Deba_0505
COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006091:IPR006090:IPR009075:IPR009100:IPR 013764; KEGG: dal:Dalk_3085 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: B8FBM2 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain.
  
     0.437
Deba_1051
Vinylacetyl-CoA Delta-isomerase; COGs: COG2368 Aromatic ring hydroxylase; InterPro IPR009100:IPR004925:IPR006091:IPR013764; KEGG: chy:CHY_1730 4-hydroxyphenylacetate 3-hydroxylase family protein; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; PRIAM: Vinylacetyl-CoA Delta-isomerase; SPTR: Q3ABD4 4-hydroxyphenylacetate 3-hydroxylase family protein; PFAM: 4-hydroxyphenylacetate 3-hydroxylase N terminal; 4-hydroxyphenylacetate 3-hydroxylase C terminal.
  
     0.434
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.