STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_3247Methyltransferase type 11; InterPro IPR013216; KEGG: mxa:MXAN_0096 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Q1DG44 Putative uncharacterized protein; PFAM: Methyltransferase domain. (255 aa)    
Predicted Functional Partners:
Deba_3244
InterPro IPR008969; KEGG: hypothetical protein; SPTR: B7G5I9 Predicted protein.
       0.560
Deba_3245
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: chy:CHY_1050 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Q3AD88 Glycosyltransferase, group 2 family; PFAM: Glycosyl transferase family 2.
  
  
 0.553
Deba_2012
InterPro IPR005186; KEGG: nis:NIS_0641 flagellar protein FlaG; PFAM: flagellar protein FlaG protein; SPTR: Q9ZFD5 FlaG (Fragment); PFAM: FlaG protein.
   
   0.529
Deba_3248
Putative cache sensor protein; InterPro IPR013163; KEGG: dal:Dalk_1114 cache, type 2 domain protein; PFAM: Cache type 2 domain protein; SPTR: B8F971 Cache, type 2 domain protein; PFAM: Cache domain.
       0.528
Deba_3246
KEGG: rca:Rcas_3345 hypothetical protein; SPTR: A7NP99 Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.527
Deba_1976
Protein of unknown function DUF1722; COGs: COG3272 conserved hypothetical protein; InterPro IPR007553:IPR013560:IPR017087; KEGG: sat:SYN_02271 putative cytoplasmic protein; PFAM: Protein of unknown function DUF1722; protein of unknown function DUF523; SPTR: Q2LQU0 Hypothetical cytosolic protein; PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722).
     
 0.447
Deba_3097
Tetratricopeptide TPR_2 repeat protein; InterProIPR001440:IPR013105:IPR019734:IPR013026:IPR 011990; KEGG: dat:HRM2_20780 tetratricopeptide (TPR) domain protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: C0QDB3 Tetratricopeptide (TPR) domain protein; PFAM: ChAPs (Chs5p-Arf1p-binding proteins); TIGRFAM: putative PEP-CTERM system TPR-repeat lipoprotein.
  
 
 0.447
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
     
 0.430
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.