STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_3248Putative cache sensor protein; InterPro IPR013163; KEGG: dal:Dalk_1114 cache, type 2 domain protein; PFAM: Cache type 2 domain protein; SPTR: B8F971 Cache, type 2 domain protein; PFAM: Cache domain. (166 aa)    
Predicted Functional Partners:
Deba_0136
KEGG: dal:Dalk_2308 cache, type 2 domain protein; SPTR: B8FIL1 Cache, type 2 domain protein.
  
  
 
0.921
Deba_2223
KEGG: dal:Dalk_2308 cache, type 2 domain protein; SPTR: B8FIL1 Cache, type 2 domain protein.
  
  
 
0.921
Deba_0157
Putative cache sensor protein; COGs: COG4564 Signal transduction histidine kinase; InterPro IPR013163; KEGG: dma:DMR_14010 methyl-accepting chemotaxis protein; PFAM: Cache type 2 domain protein; SPTR: C4XMV1 Methyl-accepting chemotaxis protein; PFAM: Cache domain.
  
     0.714
Deba_2253
Putative cache sensor protein; COGs: COG4564 Signal transduction histidine kinase; InterPro IPR013163; KEGG: dvl:Dvul_2639 methyl-accepting chemotaxis sensory transducer; PFAM: Cache type 2 domain protein; SPTR: Q72F70 Methyl-accepting chemotaxis protein; PFAM: Cache domain.
  
     0.705
Deba_0156
Putative cache sensor protein; COGs: COG4564 Signal transduction histidine kinase; InterPro IPR013163; KEGG: dma:DMR_14010 methyl-accepting chemotaxis protein; PFAM: Cache type 2 domain protein; SPTR: C4XMV1 Methyl-accepting chemotaxis protein; PFAM: Cache domain.
  
     0.685
Deba_2128
Hypothetical protein; KEGG: gur:Gura_3066 cache type 2 domain-containing protein; SPTR: A5G619 Cache, type 2 domain protein.
  
     0.667
Deba_3247
Methyltransferase type 11; InterPro IPR013216; KEGG: mxa:MXAN_0096 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Q1DG44 Putative uncharacterized protein; PFAM: Methyltransferase domain.
       0.528
Deba_0576
Diheme cytochrome c; InterPro IPR018588:IPR009056; KEGG: dde:Dde_1896 putative lipoprotein; PFAM: Dihaem cytochrome c; SPTR: Q310F3 Lipoprotein, putative; PFAM: Dihaem cytochrome c.
  
     0.430
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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