STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43633.1PFAM: lipolytic protein G-D-S-L family; KEGG: saq:Sare_0027 GDSL family lipase. (256 aa)    
Predicted Functional Partners:
ADL43634.1
KEGG: sma:SAV_4826 hypothetical protein.
       0.785
ADL43635.1
KEGG: saq:Sare_0028 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
       0.653
ADL44019.1
PFAM: alanine racemase domain protein; KEGG: saq:Sare_4405 hypothetical protein.
  
     0.600
ADL47717.1
KEGG: saq:Sare_3204 DNA-directed DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase.
  
     0.558
ADL44017.1
KEGG: saq:Sare_4407 FAD-linked oxidoreductase; TIGRFAM: FAD-linked oxidoreductase; PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein.
  
     0.506
ADL49315.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: stp:Strop_4226 hypothetical protein.
  
     0.483
ADL46548.1
FAD-linked oxidoreductase; KEGG: ddr:Deide_3p02290 putative FAD/FMN-containing dehydrogenase; putative L-gulonolactone oxidase; TIGRFAM: FAD-linked oxidoreductase; PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein.
  
     0.470
ADL48218.1
PFAM: copper resistance protein CopC; KEGG: sro:Sros_6847 conserved hypothetical protein of Cu resistance protein CopC-like protein.
 
     0.457
ADL43632.1
KEGG: sro:Sros_3285 hypothetical protein.
       0.449
ADL43631.1
SMART: Pyrrolo-quinoline quinone beta-propeller repeat; KEGG: sro:Sros_3286 hypothetical protein.
  
    0.427
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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