STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43658.1Protein of unknown function DUF397; KEGG: saq:Sare_0042 hypothetical protein; manually curated; PFAM: protein of unknown function DUF397. (73 aa)    
Predicted Functional Partners:
ADL43657.1
Helix-turn-helix domain protein; KEGG: saq:Sare_0041 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
   
 0.943
ADL48799.1
PFAM: protein of unknown function DUF397; KEGG: stp:Strop_3743 hypothetical protein.
  
     0.754
ADL44904.1
KEGG: saq:Sare_1160 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
   
 0.738
ADL47881.1
KEGG: saq:Sare_3365 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.727
ADL47621.1
KEGG: saq:Sare_0600 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.726
ADL48258.1
Manually curated; PFAM: helix-turn-helix domain protein; KEGG: stp:Strop_0644 helix-turn-helix domain-containing protein; SMART: helix-turn-helix domain protein.
  
     0.722
ADL48798.1
SMART: helix-turn-helix domain protein; KEGG: saq:Sare_4123 helix-turn-helix domain-containing protein.
  
     0.722
ADL46331.1
PFAM: protein of unknown function DUF397; KEGG: stp:Strop_2090 hypothetical protein.
  
     0.714
ADL45117.1
KEGG: tcu:Tcur_4696 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
     0.708
ADL46332.1
KEGG: saq:Sare_2232 hypothetical protein.
 
     0.702
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.