STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43678.1Protein of unknown function DUF21; KEGG: sna:Snas_6404 hypothetical protein; manually curated; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region. (435 aa)    
Predicted Functional Partners:
ADL43679.1
PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: sna:Snas_6403 hypothetical protein.
 
   
0.962
ADL45080.1
KEGG: saq:Sare_1369 hypothetical protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; SMART: CBS domain containing protein.
 
   
0.579
ADL43677.1
PFAM: Golgi phosphoprotein 3; KEGG: ami:Amir_0084 hypothetical protein.
       0.566
ADL43680.1
PFAM: NLP/P60 protein; KEGG: saq:Sare_0060 NLP/P60 protein.
       0.461
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
 
    0.414
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.