STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43696.1PFAM: NUDIX hydrolase; KEGG: kfl:Kfla_6947 NUDIX hydrolase. (188 aa)    
Predicted Functional Partners:
ADL43695.1
PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sro:Sros_0846 LysR family transcriptional regulator.
       0.671
ADL43697.1
PFAM: regulatory protein MerR; Protein phosphatase 2C-like; KEGG: stp:Strop_2316 regulatory protein, MerR; SMART: regulatory protein MerR; protein phosphatase 2C domain protein.
       0.559
ADL43698.1
PFAM: Luciferase-like, subgroup; KEGG: saq:Sare_0082 luciferase family protein.
       0.514
ADL43693.1
KEGG: sna:Snas_3209 GCN5-related N-acetyltransferase.
  
    0.494
ADL43694.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sro:Sros_0848 hypothetical protein.
       0.482
ADL46242.1
KEGG: scb:SCAB_57811 hypothetical protein.
  
     0.462
ADL46948.1
PFAM: transglutaminase domain-containing protein; KEGG: kfl:Kfla_4938 transglutaminase domain protein.
  
     0.426
ADL47329.1
PFAM: FAD dependent oxidoreductase; KEGG: saq:Sare_2137 FAD dependent oxidoreductase.
  
     0.410
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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