STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (215 aa)    
Predicted Functional Partners:
ADL43702.1
Stage II sporulation protein E; KEGG: saq:Sare_0085 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein.
       0.610
ADL43700.1
PFAM: phosphoribosyltransferase; KEGG: stp:Strop_0086 phosphoribosyltransferase.
       0.525
ADL43699.1
PFAM: protein of unknown function DUF437; KEGG: sco:SCO4741 hypothetical protein.
       0.438
ADL49764.1
Peptidoglycan glycosyltransferase; KEGG: saq:Sare_5078 glycosyl transferase family protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
 
   
 0.421
ADL43629.1
KEGG: stp:Strop_3157 hypothetical protein.
  
 
 0.412
ADL43630.1
KEGG: stp:Strop_3157 hypothetical protein.
  
 
 0.412
ADL43806.1
PFAM: WD40-like beta Propeller containing protein; KEGG: sal:Sala_2007 peptidase S9, prolyl oligopeptidase active site region.
  
 
 0.412
ADL46041.1
PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; WD40-like beta Propeller containing protein; KEGG: stp:Strop_0590 peptidase S9B dipeptidylpeptidase IV subunit.
  
 
 0.412
ADL46908.1
Hypothetical protein; KEGG: tcu:Tcur_2013 serine/threonine protein kinase.
  
 
 0.412
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.