STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43736.1KEGG: saq:Sare_0121 hypothetical protein. (227 aa)    
Predicted Functional Partners:
speE
Spermine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.958
ADL43737.1
KEGG: saq:Sare_0122 hypothetical protein.
 
    0.952
ADL43739.1
PFAM: protein of unknown function DUF350; KEGG: saq:Sare_0124 hypothetical protein.
 
     0.930
ADL43738.1
KEGG: saq:Sare_0123 hypothetical protein.
       0.836
ADL48146.1
PFAM: protein of unknown function DUF350; KEGG: tfu:Tfu_2235 hypothetical protein.
 
     0.788
ADL43740.1
KEGG: saq:Sare_0125 hypothetical protein.
       0.774
ADL43742.1
KEGG: stp:Strop_1603 hypothetical protein.
       0.660
ADL43735.1
KEGG: scb:SCAB_8651 hypothetical protein.
       0.658
ADL43743.1
KEGG: stp:Strop_0122 hypothetical protein.
 
     0.619
ADL45442.1
SMART: helix-turn-helix domain protein; KEGG: tcu:Tcur_0556 transcriptional regulator, XRE family.
  
     0.574
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.