STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43811.1KEGG: stp:Strop_4439 phytoene dehydrogenase-related protein; TIGRFAM: phytoene desaturase; PFAM: amine oxidase. (504 aa)    
Predicted Functional Partners:
ADL43813.1
Phytoene synthase; KEGG: saq:Sare_4931 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase.
 
 0.999
ADL46813.1
PFAM: Lycopene beta and epsilon cyclase; KEGG: stp:Strop_2408 lycopene beta and epsilon cyclase.
 
 
 0.984
idi
Isopentenyl-diphosphate delta-isomerase, type 1; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.938
ADL43812.1
PFAM: Polyprenyl synthetase; KEGG: saq:Sare_4930 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
  
 0.866
ADL43809.1
Regulatory protein MerR; KEGG: saq:Sare_4927 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR.
       0.794
ADL43814.1
KEGG: sro:Sros_1613 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein.
 
  
 0.782
ADL49293.1
PFAM: amine oxidase; KEGG: saq:Sare_0282 amine oxidase.
 
   
 0.641
ADL48666.1
PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; KEGG: saq:Sare_4033 homoserine dehydrogenase.
      
 0.602
ADL43808.1
PFAM: polysaccharide deacetylase; KEGG: stp:Strop_0292 polysaccharide deacetylase.
       0.575
ADL47419.1
Beta-ketoacyl synthase; KEGG: cai:Caci_2598 KR domain protein; PFAM: Beta-ketoacyl synthase; KR domain protein; Enoyl-CoA hydratase/isomerase; phosphopantetheine-binding; Methyltransferase type 12; aromatic amino acid beta-eliminating lyase/threonine aldolase; alpha/beta hydrolase fold; SMART: Polyketide synthase, beta-ketoacyl synthase region; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase/Fatty acid synthase, KR.
  
  
 0.572
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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