STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43828.1KEGG: saq:Sare_4972 SAF domain-containing protein; PFAM: SAF domain protein; SMART: SAF domain protein. (222 aa)    
Predicted Functional Partners:
ADL43824.1
PFAM: Type II secretion system F domain; KEGG: saq:Sare_4968 type II secretion system protein.
 
    0.958
ADL43827.1
KEGG: stp:Strop_4458 hypothetical protein.
 
    0.958
ADL43825.1
PFAM: Type II secretion system F domain; KEGG: stp:Strop_4456 type II secretion system protein.
 
    0.956
ADL43829.1
KEGG: saq:Sare_4973 hypothetical protein.
 
     0.950
ADL43821.1
PFAM: TadE family protein; KEGG: stp:Strop_4452 TadE family protein.
 
    0.941
ADL43822.1
PFAM: TadE family protein; KEGG: stp:Strop_4453 TadE family protein.
 
    0.941
ADL43819.1
Peptidoglycan-binding lysin domain; KEGG: stp:Strop_4449 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
     0.931
ADL43820.1
KEGG: stp:Strop_4450 hypothetical protein.
 
     0.928
ADL43826.1
PFAM: type II secretion system protein E; KEGG: stp:Strop_4457 type II secretion system protein E.
 
    0.892
ADL47214.1
TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation protein E; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: kfl:Kfla_4457 multi-sensor signal transduction histidine kinase; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; protein phosphatase 2C domain protein.
   
  
 0.837
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.