STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43850.1KEGG: sco:SCO5931 xylanase A; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10. (201 aa)    
Predicted Functional Partners:
ADL43853.1
KEGG: family 10 glycoside hydrolase; PFAM: glycoside hydrolase family 10; Ricin B lectin; Methyltransferase type 11; SMART: glycoside hydrolase family 10; Ricin B lectin.
 
     0.877
ADL49492.1
Alpha-N-arabinofuranosidase; PFAM: Ricin B lectin; KEGG: ami:Amir_4966 alpha-N-arabinofuranosidase; SMART: Ricin B lectin.
 
   0.807
ADL46532.1
Cellulose-binding family II; KEGG: family 62 glycoside hydrolase; PFAM: cellulose-binding family II; SMART: cellulose-binding family II.
   
 0.744
ADL47198.1
Ricin B lectin; KEGG: glycoside hydrolase family 43; PFAM: Ricin B lectin; glycoside hydrolase family 43; SMART: Ricin B lectin.
   
 0.743
ADL47228.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; cellulose-binding family II; KEGG: xce:Xcel_0742 endo-1,4-beta-xylanase; SMART: cellulose-binding family II; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
   
 0.735
ADL46503.1
TIGRFAM: esterase, PHB depolymerase family; PFAM: cellulose-binding family II; KEGG: PHB depolymerase family esterase; SMART: cellulose-binding family II.
 
   0.698
ADL47911.1
KEGG: cellulose-binding family II; PFAM: cellulose-binding family II; FG-GAP repeat protein; SMART: cellulose-binding family II.
 
   
 0.696
ADL47150.1
Cellulose-binding family II; KEGG: ami:Amir_4964 pectinesterase; PFAM: cellulose-binding family II; Pectinesterase; SMART: cellulose-binding family II.
  
     0.679
ADL46531.1
Cellulose-binding family II; KEGG: ttu:TERTU_4269 O-glycosyl hydrolase family 30; PFAM: cellulose-binding family II; glycoside hydrolase family 30; SMART: cellulose-binding family II.
 
   
 0.656
ADL45506.1
KEGG: carbohydrate binding family 6; PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; cellulose-binding family II; SMART: cellulose binding type IV; cellulose-binding family II; Belongs to the glycosyl hydrolase 43 family.
   
 0.653
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.