STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43856.1SMART: helix-turn-helix domain protein; KEGG: saq:Sare_4805 hypothetical protein. (473 aa)    
Predicted Functional Partners:
ADL44099.1
SMART: helix-turn-helix domain protein; KEGG: sro:Sros_3358 hypothetical protein.
  
     0.726
ADL43624.1
SMART: helix-turn-helix domain protein; KEGG: saq:Sare_0926 helix-turn-helix domain-containing protein.
  
     0.694
ADL47786.1
KEGG: saq:Sare_1433 hypothetical protein.
  
     0.683
ADL48798.1
SMART: helix-turn-helix domain protein; KEGG: saq:Sare_4123 helix-turn-helix domain-containing protein.
  
     0.667
ADL48492.1
KEGG: saq:Sare_4868 XRE family plasmid maintenance system antidote protein.
  
     0.648
ADL44904.1
KEGG: saq:Sare_1160 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.637
ADL48799.1
PFAM: protein of unknown function DUF397; KEGG: stp:Strop_3743 hypothetical protein.
  
     0.629
ADL44100.1
PFAM: protein of unknown function DUF397; KEGG: saq:Sare_1432 hypothetical protein.
  
     0.608
ADL48820.1
Hypothetical protein; KEGG: scb:SCAB_83001 putative integral membrane protein.
  
     0.608
ADL47881.1
KEGG: saq:Sare_3365 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.603
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.