STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43868.1KEGG: gob:Gobs_0852 hypothetical protein. (99 aa)    
Predicted Functional Partners:
ADL43869.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: sro:Sros_5491 NAD-dependent epimerase/dehydratase.
 
     0.727
ADL48526.1
KEGG: gob:Gobs_4745 putative phosphodiesterase.
  
     0.678
ADL43867.1
KEGG: gym:GYMC10_3335 hypothetical protein.
       0.505
ADL46405.1
KEGG: stp:Strop_3478 hypothetical protein.
  
     0.493
ADL48392.1
KEGG: saq:Sare_3857 hypothetical protein.
  
     0.484
ADL45610.1
KEGG: kra:Krad_0814 hypothetical protein.
  
     0.428
ADL43888.1
Stage II sporulation protein E; KEGG: sro:Sros_2264 serine phosphatase RsbU regulator of sigma subunit-like protein; PFAM: Stage II sporulation protein E; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein.
  
     0.413
ADL48241.1
KEGG: saq:Sare_3637 hypothetical protein.
  
     0.405
ADL45259.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bpy:Bphyt_0286 endonuclease/exonuclease/phosphatase.
  
     0.404
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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