STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43904.1PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: saq:Sare_4518 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. (191 aa)    
Predicted Functional Partners:
ADL43907.1
KEGG: saq:Sare_4515 cytochrome c assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein.
  
  
 0.990
ADL43903.1
KEGG: saq:Sare_4519 phosphoglycerate mutase; manually curated; PFAM: Phosphoglycerate mutase.
  
   0.988
hemL
KEGG: stp:Strop_4100 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III.
  
  
 0.987
ADL43906.1
KEGG: stp:Strop_4096 ResB family protein.
  
  
 0.984
ADL43905.1
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: stp:Strop_4097 cytochrome c biogenesis protein, transmembrane region.
 
  
 0.965
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.886
ADL44875.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tcu:Tcur_4243 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 0.874
ADL47652.1
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: saq:Sare_4517 cytochrome c biogenesis protein transmembrane region.
 
  
 0.848
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
  
 0.771
ADL46484.1
KEGG: sro:Sros_4539 hypothetical protein.
  
 
 0.763
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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