STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43909.1KEGG: scb:SCAB_51721 putative ATP/GTP binding protein. (494 aa)    
Predicted Functional Partners:
ADL44688.1
PFAM: DUF234 DEXX-box ATPase; KEGG: sro:Sros_1281 hypothetical protein.
 
     0.741
ADL43908.1
Hypothetical protein.
       0.546
ADL43994.1
KEGG: M6 family metalloprotease domain-containing protein; TIGRFAM: M6 family metalloprotease domain protein; PFAM: peptidase M6 immune inhibitor A.
  
     0.510
ADL47803.1
PFAM: Terpene synthase metal-binding domain-containing protein; KEGG: saq:Sare_1287 terpene synthase metal-binding domain-containing protein.
  
     0.475
ADL44103.1
KEGG: mbt:JTY_2278 hypothetical protein.
 
     0.434
ADL46104.1
KEGG: scb:SCAB_3871 hypothetical protein; PFAM: protein of unknown function DUF1680; Ricin B lectin; SMART: Ricin B lectin.
  
     0.419
ADL47802.1
PFAM: Prenyltransferase/squalene oxidase; KEGG: saq:Sare_1288 hypothetical protein.
  
     0.400
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.