STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43914.1PFAM: Terpene synthase metal-binding domain-containing protein; KEGG: rxy:Rxyl_0493 terpene synthase, metal-binding protein. (321 aa)    
Predicted Functional Partners:
ADL46503.1
TIGRFAM: esterase, PHB depolymerase family; PFAM: cellulose-binding family II; KEGG: PHB depolymerase family esterase; SMART: cellulose-binding family II.
  
     0.650
ADL43685.1
KEGG: saq:Sare_0063 hypothetical protein.
  
    0.626
ADL47224.1
KEGG: cai:Caci_6475 ricin B lectin; PFAM: Ricin B lectin; SMART: Ricin B lectin.
  
     0.620
ADL47255.1
TIGRFAM: esterase, PHB depolymerase family; PFAM: cellulose-binding family II; KEGG: PHB depolymerase family esterase; SMART: cellulose-binding family II.
  
     0.599
ADL46418.1
KEGG: sna:Snas_1689 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
  
     0.571
ADL48122.1
TIGRFAM: esterase, PHB depolymerase family; KEGG: tfu:Tfu_0082 esterase, PHB depolymerase.
  
     0.567
ADL43915.1
KEGG: saq:Sare_4512 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein.
       0.561
ADL45325.1
PFAM: Domain of unknown function DUF1994; KEGG: sen:SACE_3265 secreted protein.
  
     0.560
ADL45432.1
PFAM: Domain of unknown function DUF1994; KEGG: sen:SACE_3265 secreted protein.
  
     0.549
ADL48676.1
SMART: Cupin domain protein; TIGRFAM: bicupin, oxalate decarboxylase family; KEGG: bsu:BSU33240 oxalate decarboxylase; PFAM: Cupin domain protein.
  
     0.538
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.