STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43926.1PFAM: NLP/P60 protein; KEGG: saq:Sare_4506 NLP/P60 protein. (531 aa)    
Predicted Functional Partners:
ADL47878.1
PFAM: NLP/P60 protein; KEGG: sna:Snas_3759 NLP/P60 protein.
  
     0.733
ADL43925.1
KEGG: saq:Sare_4507 hypothetical protein.
 
     0.644
mqnE
Radical SAM domain protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.
       0.437
ADL43928.1
KEGG: saq:Sare_4504 hypothetical protein.
       0.437
ADL43682.1
PFAM: NLP/P60 protein; KEGG: stp:Strop_0055 NLP/P60 protein.
 
  
0.425
ADL43680.1
PFAM: NLP/P60 protein; KEGG: saq:Sare_0060 NLP/P60 protein.
 
  
0.417
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.