STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43934.1KEGG: saq:Sare_4499 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (259 aa)    
Predicted Functional Partners:
ADL43932.1
PFAM: periplasmic binding protein; KEGG: saq:Sare_4501 periplasmic binding protein.
 
 
 0.989
ADL43933.1
PFAM: transport system permease protein; KEGG: stp:Strop_4080 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.986
ADL45705.1
PFAM: transport system permease protein; KEGG: sna:Snas_3528 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.948
ADL47182.1
PFAM: transport system permease protein; KEGG: tcu:Tcur_0076 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.937
ADL45706.1
PFAM: transport system permease protein; KEGG: sna:Snas_3527 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.933
ADL46130.1
PFAM: transport system permease protein; KEGG: kfl:Kfla_5845 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.907
ADL45708.1
PFAM: periplasmic binding protein; KEGG: sna:Snas_3525 periplasmic binding protein.
 
 
 0.827
ADL46129.1
PFAM: periplasmic binding protein; KEGG: kfl:Kfla_5846 periplasmic binding protein.
 
 
 0.743
ADL46493.1
PFAM: periplasmic binding protein; KEGG: nca:Noca_0957 periplasmic binding protein.
 
 
 0.712
ADL47181.1
PFAM: periplasmic binding protein; KEGG: tcu:Tcur_0075 periplasmic binding protein.
 
 
 0.681
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.