STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL43939.1KEGG: cai:Caci_1295 hypothetical protein; Belongs to the WXG100 family. (308 aa)    
Predicted Functional Partners:
ADL43941.1
Hypothetical protein; KEGG: mpo:Mpop_3302 4-diphosphocytidyl-2C-methyl-D-erythritol kinase.
       0.786
ADL43938.1
KEGG: bpm:BURPS1710b_2806 hypothetical protein.
       0.782
ADL43940.1
Uncharacterized protein family UPF0133; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
       0.762
ADL46591.1
KEGG: ami:Amir_0572 YD repeat protein.
  
     0.706
ADL45674.1
TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ami:Amir_5142 deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; Belongs to the dGTPase family. Type 2 subfamily.
  
     0.529
ADL43936.1
PFAM: ABC-2 type transporter; KEGG: fra:Francci3_4202 hypothetical protein.
       0.517
ADL43937.1
KEGG: sro:Sros_2548 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.517
ADL46593.1
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
     0.517
ADL46431.1
PFAM: cell divisionFtsK/SpoIIIE; KEGG: saq:Sare_2304 cell divisionFtsK/SpoIIIE.
 
 
 
 0.506
ADL44647.1
PFAM: aminoglycoside phosphotransferase; KEGG: saq:Sare_3081 aminoglycoside phosphotransferase.
  
     0.482
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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