STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44000.1KEGG: saq:Sare_4422 hypothetical protein. (367 aa)    
Predicted Functional Partners:
ADL44001.1
PFAM: type II secretion system protein E; KEGG: saq:Sare_4421 type II secretion system protein E.
 
   
 0.823
ADL47650.1
KEGG: aau:AAur_pTC10124 partitioning protein ParB family; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease.
 
 
 0.716
ADL49785.1
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: saq:Sare_5104 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
  
 
 0.669
ADL44002.1
KEGG: saq:Sare_4420 hypothetical protein.
 
     0.579
ADL48812.1
PFAM: UvrD/REP helicase; KEGG: stp:Strop_3749 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
  
  
 0.568
ADL44003.1
PFAM: Type II secretion system F domain; KEGG: stp:Strop_4037 type II secretion system protein.
 
     0.565
ADL49763.1
KEGG: saq:Sare_5074 hypothetical protein.
  
     0.528
ADL44004.1
KEGG: stp:Strop_4036 hypothetical protein.
       0.516
ADL49221.1
PFAM: protein of unknown function DUF1416; KEGG: saq:Sare_0341 hypothetical protein.
  
     0.490
ADL48636.1
PFAM: Protein of unknown function DUF2550; KEGG: saq:Sare_4009 hypothetical protein.
  
     0.482
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.