STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44001.1PFAM: type II secretion system protein E; KEGG: saq:Sare_4421 type II secretion system protein E. (403 aa)    
Predicted Functional Partners:
ADL44003.1
PFAM: Type II secretion system F domain; KEGG: stp:Strop_4037 type II secretion system protein.
 
  
 0.907
ADL44000.1
KEGG: saq:Sare_4422 hypothetical protein.
 
   
 0.823
ADL44002.1
KEGG: saq:Sare_4420 hypothetical protein.
  
  
 0.710
ADL44004.1
KEGG: stp:Strop_4036 hypothetical protein.
     
 0.576
ADL49576.1
PFAM: Type II secretion system F domain; KEGG: fra:Francci3_1734 type II secretion system protein.
 
  
 0.541
ADL43827.1
KEGG: stp:Strop_4458 hypothetical protein.
  
  
 0.498
ADL44271.1
KEGG: SAF domain protein.
  
  
 0.497
ADL43824.1
PFAM: Type II secretion system F domain; KEGG: saq:Sare_4968 type II secretion system protein.
  
  
 0.474
ADL43999.1
KEGG: saq:Sare_1398 hypothetical protein.
       0.466
ADL43825.1
PFAM: Type II secretion system F domain; KEGG: stp:Strop_4456 type II secretion system protein.
  
  
 0.463
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.