STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44002.1KEGG: saq:Sare_4420 hypothetical protein. (187 aa)    
Predicted Functional Partners:
ADL44003.1
PFAM: Type II secretion system F domain; KEGG: stp:Strop_4037 type II secretion system protein.
       0.817
ADL44004.1
KEGG: stp:Strop_4036 hypothetical protein.
     
 0.810
ADL44001.1
PFAM: type II secretion system protein E; KEGG: saq:Sare_4421 type II secretion system protein E.
  
  
 0.710
ADL43827.1
KEGG: stp:Strop_4458 hypothetical protein.
  
  
 0.648
ADL44271.1
KEGG: SAF domain protein.
  
  
 0.619
ADL47214.1
TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation protein E; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: kfl:Kfla_4457 multi-sensor signal transduction histidine kinase; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; protein phosphatase 2C domain protein.
   
    0.596
ADL45011.1
Stage II sporulation protein E; KEGG: sro:Sros_7544 signal transduction histidine kinase-like protein; PFAM: Stage II sporulation protein E; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: protein phosphatase 2C domain protein; response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; GAF domain protein.
   
    0.594
ADL44005.1
KEGG: stp:Strop_4035 hypothetical protein.
       0.587
ADL44000.1
KEGG: saq:Sare_4422 hypothetical protein.
 
     0.579
ADL48142.1
KEGG: stp:Strop_3338 hypothetical protein.
  
     0.527
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.