STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44075.1Regulatory protein MarR; KEGG: saq:Sare_0505 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR. (144 aa)    
Predicted Functional Partners:
ADL44076.1
PFAM: major facilitator superfamily MFS_1; KEGG: saq:Sare_0506 major facilitator transporter.
     
 0.713
ADL44074.1
PFAM: Xanthine/uracil/vitamin C permease; KEGG: stp:Strop_0416 xanthine/uracil/vitamin C permease.
       0.642
ADL44078.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.495
ADL44073.1
KEGG: saq:Sare_0503 hypothetical protein.
       0.456
ADL44077.1
KEGG: stp:Strop_0419 hypothetical protein.
       0.441
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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