STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44086.1PFAM: nitroreductase; KEGG: stp:Strop_0427 nitroreductase. (200 aa)    
Predicted Functional Partners:
ADL44085.1
PFAM: Aldose 1-epimerase; KEGG: saq:Sare_0514 aldose 1-epimerase.
  
    0.798
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
     
 0.755
ADL44084.1
PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_0425 major facilitator transporter.
       0.740
ADL44087.1
KEGG: saq:Sare_0516 hypothetical protein.
       0.634
ADL44088.1
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: saq:Sare_0517 acyl-CoA dehydrogenase domain-containing protein.
       0.527
ADL47806.1
RIO-like kinase; KEGG: stp:Strop_3064 protein of unknown function RIO1; PFAM: RIO-like kinase; SMART: protein of unknown function RIO1.
  
     0.502
ADL47419.1
Beta-ketoacyl synthase; KEGG: cai:Caci_2598 KR domain protein; PFAM: Beta-ketoacyl synthase; KR domain protein; Enoyl-CoA hydratase/isomerase; phosphopantetheine-binding; Methyltransferase type 12; aromatic amino acid beta-eliminating lyase/threonine aldolase; alpha/beta hydrolase fold; SMART: Polyketide synthase, beta-ketoacyl synthase region; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase/Fatty acid synthase, KR.
 
 
 0.488
ADL48629.1
PFAM: ABC-2 type transporter; KEGG: saq:Sare_4005 ABC-2 type transporter.
 
    0.462
ADL44082.1
KEGG: stp:Strop_0423 citrate synthase 2; PFAM: Citrate synthase; Belongs to the citrate synthase family.
  
    0.455
ADL46445.1
Putative F420-dependent oxidoreductase; KEGG: saq:Sare_2317 luciferase family protein; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup.
  
  
 0.417
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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