STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44188.1PFAM: SpoOM family protein; KEGG: saq:Sare_1549 SpoOM family protein. (338 aa)    
Predicted Functional Partners:
ADL44189.1
Hypothetical protein.
       0.773
ADL47787.1
PFAM: protein of unknown function DUF397; KEGG: saq:Sare_1432 hypothetical protein.
  
     0.536
ADL45116.1
PFAM: protein of unknown function DUF397; KEGG: stp:Strop_1416 hypothetical protein.
  
     0.535
ADL48259.1
PFAM: protein of unknown function DUF397; KEGG: sro:Sros_3357 hypothetical protein.
  
     0.506
ADL48019.1
KEGG: transcriptional regulator, XRE family.
  
     0.500
ADL45442.1
SMART: helix-turn-helix domain protein; KEGG: tcu:Tcur_0556 transcriptional regulator, XRE family.
  
     0.472
ADL46806.1
PFAM: proteinase inhibitor I16 subtilisin-type inhibitor; KEGG: sro:Sros_6731 hypothetical protein.
  
     0.465
ADL49262.1
KEGG: sma:SAV_1945 hypothetical protein.
  
     0.427
ADL49076.1
PFAM: Protein of unknown function DUF2252; KEGG: sro:Sros_2087 hypothetical protein.
 
     0.420
ADL43739.1
PFAM: protein of unknown function DUF350; KEGG: saq:Sare_0124 hypothetical protein.
  
     0.419
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.