STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44201.1KEGG: hypothetical protein. (216 aa)    
Predicted Functional Partners:
ADL44200.1
PFAM: Abortive infection protein; KEGG: sna:Snas_0269 abortive infection protein.
 
     0.908
ADL44202.1
PFAM: regulatory protein TetR; KEGG: sna:Snas_0270 transcriptional regulator, TetR family.
 
     0.907
ADL44199.1
Hypothetical protein; KEGG: sen:SACE_5712 retron-type reverse transcriptase.
       0.668
ADL48651.1
PFAM: regulatory protein TetR; KEGG: kfl:Kfla_2053 transcriptional regulator, TetR family.
  
     0.594
ADL47707.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: kfl:Kfla_6359 FAD dependent oxidoreductase.
  
     0.542
ADL47708.1
PFAM: extracellular solute-binding protein family 1; KEGG: kfl:Kfla_6360 extracellular solute-binding protein family 1.
  
     0.407
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.