STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44290.1PFAM: Saccharopine dehydrogenase; KEGG: sro:Sros_4494 saccharopine dehydrogenase. (336 aa)    
Predicted Functional Partners:
ADL45825.1
KEGG: sro:Sros_1612 putative transcriptional regulator, MerR family.
  
     0.679
ADL46598.1
KEGG: kfl:Kfla_4491 hypothetical protein.
  
     0.635
ADL44289.1
ThiJ/PfpI domain-containing protein; KEGG: sro:Sros_4495 AraC family transcriptional regulator; PFAM: ThiJ/PfpI domain-containing protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
 
    0.619
ADL43809.1
Regulatory protein MerR; KEGG: saq:Sare_4927 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR.
  
     0.583
ADL45729.1
PFAM: GCN5-related N-acetyltransferase; KEGG: kfl:Kfla_1892 GCN5-related N-acetyltransferase.
  
     0.575
ADL47892.1
PFAM: Abortive infection protein; KEGG: sro:Sros_5184 hypothetical protein.
  
     0.549
ADL45341.1
KEGG: scb:SCAB_60851 hypothetical protein.
  
     0.509
ADL44291.1
KEGG: ami:Amir_2781 glycoside hydrolase family 5; PFAM: glycoside hydrolase family 5; cellulose-binding family II; protein of unknown function DUF291; SMART: cellulose-binding family II.
       0.491
ADL45469.1
PFAM: protein of unknown function DUF214; KEGG: sro:Sros_0089 ABC-type transport system involved in lipoprotein release permease component-like protein.
  
     0.480
ADL49585.1
KEGG: scb:SCAB_60851 hypothetical protein.
  
     0.454
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.