STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44314.1PFAM: Resolvase helix-turn-helix domain protein; KEGG: tcu:Tcur_0996 hypothetical protein. (282 aa)    
Predicted Functional Partners:
ADL44315.1
KEGG: tcu:Tcur_0996 hypothetical protein.
 
    
0.797
ADL44062.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: sna:Snas_6098 ErfK/YbiS/YcfS/YnhG family protein.
  
     0.645
ADL49618.1
KEGG: tcu:Tcur_0546 protein of unknown function DUF88.
  
     0.627
ADL47907.1
KEGG: tcu:Tcur_2861 hypothetical protein.
  
     0.619
ADL44313.1
PFAM: regulatory protein TetR; KEGG: saq:Sare_0731 TetR family transcriptional regulator.
       0.564
ADL46962.1
KEGG: scb:SCAB_66761 hypothetical protein.
  
     0.534
ADL44236.1
KEGG: stp:Strop_0719 hypothetical protein.
  
     0.513
glmU
UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
       0.499
ADL46850.1
Regulatory protein LuxR; KEGG: kfl:Kfla_1331 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; AAA ATPase.
  
     0.498
ADL49728.1
KEGG: sna:Snas_5909 hypothetical protein.
  
     0.495
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.