STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44325.1KEGG: stp:Strop_0796 CBS domain-containing protein; PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein. (311 aa)    
Predicted Functional Partners:
ADL43679.1
PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: sna:Snas_6403 hypothetical protein.
 
    0.822
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.692
ADL45080.1
KEGG: saq:Sare_1369 hypothetical protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; SMART: CBS domain containing protein.
 
   
0.622
ADL44327.1
PFAM: Phosphoesterase HXTX; KEGG: saq:Sare_0742 phosphoesterase HXTX.
       0.621
ADL44328.1
PFAM: ribonuclease BN; KEGG: saq:Sare_0743 ribonuclease BN.
  
    0.510
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
       0.495
ADL44324.1
KEGG: saq:Sare_0739 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.475
ADL44329.1
Regulatory protein GntR HTH; KEGG: nml:Namu_0548 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.474
ADL44330.1
KEGG: saq:Sare_0744 hypothetical protein.
       0.445
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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