STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44346.1Regulatory protein MarR; KEGG: sro:Sros_1741 putative MarR-family regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR. (161 aa)    
Predicted Functional Partners:
ADL44345.1
rRNA (guanine-N(1)-)-methyltransferase; KEGG: stp:Strop_0814 methyltransferase type 11; PFAM: Methyltransferase type 12.
       0.773
ADL44348.1
PFAM: NADPH-dependent FMN reductase; KEGG: sro:Sros_1740 putative reductase.
       0.568
ADL44347.1
PFAM: protein of unknown function DUF161; KEGG: saq:Sare_3411 hypothetical protein.
       0.558
ADL44349.1
Putative F420-dependent enzyme; KEGG: saq:Sare_3945 pyridoxamine 5'-phosphate oxidase-related FMN-binding; TIGRFAM: putative F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding.
       0.558
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TIGRFAM: adenosine deaminase; KEGG: stp:Strop_0815 adenosine deaminase; PFAM: adenosine/AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.
       0.452
ADL45147.1
KEGG: stp:Strop_1473 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; AAA ATPase.
  
     0.425
whiB-2
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
   
 0.409
ADL48437.1
KEGG: stp:Strop_3516 hypothetical protein.
  
     0.403
mca
Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
     0.402
nucS
Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
     0.400
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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