STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44360.1KEGG: kfl:Kfla_7068 hypothetical protein. (227 aa)    
Predicted Functional Partners:
ADL44361.1
TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: stp:Strop_0822 ABC transporter, transmembrane region, type 1; SMART: AAA ATPase.
       0.701
ADL45993.1
KEGG: pca:Pcar_1367 hypothetical protein.
  
     0.663
ADL46140.1
KEGG: kfl:Kfla_2909 N-acetylmuramoyl-L-alanine amidase family 2; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2.
  
     0.627
ADL46555.1
KEGG: bcv:Bcav_3012 alpha/beta hydrolase fold protein.
  
     0.625
ADL44363.1
KEGG: sna:Snas_1111 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
       0.615
ADL48692.1
KEGG: sna:Snas_2708 cellulose-binding family II; PFAM: cellulose-binding family II; Fibronectin type III domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein.
  
     0.601
ADL49754.1
KEGG: kfl:Kfla_1421 hypothetical protein.
  
     0.598
ADL44715.1
KEGG: sna:Snas_3729 hypothetical protein.
  
     0.581
ADL44364.1
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sro:Sros_3280 cytochrome d ubiquinol oxidase subunit I.
       0.576
ADL44362.1
TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: stp:Strop_0823 ABC transporter, transmembrane region, type 1; SMART: AAA ATPase.
       0.569
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.