STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44361.1TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: stp:Strop_0822 ABC transporter, transmembrane region, type 1; SMART: AAA ATPase. (612 aa)    
Predicted Functional Partners:
ADL44362.1
TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: stp:Strop_0823 ABC transporter, transmembrane region, type 1; SMART: AAA ATPase.
 
 
0.999
ADL44363.1
KEGG: sna:Snas_1111 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
 
  
 0.989
ADL44364.1
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sro:Sros_3280 cytochrome d ubiquinol oxidase subunit I.
 
  
 0.981
ADL46711.1
KEGG: saq:Sare_2481 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
 
  
 0.935
ADL46710.1
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: stp:Strop_2339 cytochrome bd ubiquinol oxidase, subunit I.
 
  
 0.883
ADL44360.1
KEGG: kfl:Kfla_7068 hypothetical protein.
       0.701
ADL48895.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: saq:Sare_4180 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.634
ADL44366.1
Penicillinase repressor; KEGG: saq:Sare_0769 CopY family transcriptional regulator; manually curated; PFAM: Penicillinase repressor.
       0.571
ADL44365.1
PFAM: peptidase M48 Ste24p; KEGG: stp:Strop_0824 peptidase M48, Ste24p.
       0.547
ADL46248.1
Alanine--tRNA ligase; KEGG: sco:SCO7600 alanyl tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like.
  
     0.475
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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