STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL44398.1PFAM: major facilitator superfamily MFS_1; KEGG: cai:Caci_8086 major facilitator superfamily MFS_1. (511 aa)    
Predicted Functional Partners:
ADL44688.1
PFAM: DUF234 DEXX-box ATPase; KEGG: sro:Sros_1281 hypothetical protein.
  
     0.687
ADL44397.1
PFAM: ABC-2 type transporter; KEGG: cai:Caci_3247 ABC-2 type transporter.
       0.634
ADL46116.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: cai:Caci_3677 cupin 2 conserved barrel domain protein.
  
     0.596
ADL44396.1
TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: cai:Caci_3246 daunorubicin resistance ABC transporter ATPase subunit; SMART: AAA ATPase.
       0.548
ADL46117.1
PFAM: NADPH-dependent FMN reductase; KEGG: cai:Caci_3676 NADPH-dependent FMN reductase.
  
     0.524
ADL48137.1
KEGG: saq:Sare_3579 hypothetical protein.
  
     0.436
ADL44395.1
PFAM: transcriptional regulator PadR family protein; KEGG: sna:Snas_0784 transcriptional regulator, PadR-like family.
       0.414
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.